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Data Integration in Bioinformatics using OGSA-DAI

Crompton, Shirley, Matthews, Brian, Gray, William Alexander, Jones, Andrew Clifford and White, Richard John 2005. Data Integration in Bioinformatics using OGSA-DAI. Presented at: 4th UK e-Science Programme All Hands Meeting, Nottingham, UK, 19-22 September 2005. Published in: Cox, S. J. and Walker, David William eds. Proceedings of the 4th UK e-Science Programme All Hands Meeting. Swindon: EPSRC, p. 500.

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The BioDA project is investigating how Bioinformatics GRIDs, a data and compute intensive domain, could benefit from using a standard framework, such as OGSA-DAI, to manage access to, and integration of, distributed heterogeneous data resources. In this paper, we outline the common data access and integration requirements from the bioinformatics community. We then highlight some specific issues encountered while designing an OGSA-DAI exemplar application for BiodiversityWorld, a Biodiversity GRID that specialises in extracting knowledge from correlating a plethora of distributed heterogeneous data sources in the study of biodiversity patterns.

Item Type: Conference or Workshop Item (Paper)
Date Type: Publication
Status: Published
Schools: Computer Science & Informatics
Subjects: Q Science > QA Mathematics > QA76 Computer software
Publisher: EPSRC
ISBN: 1904425534
Last Modified: 09 Nov 2022 09:22

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