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Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, Kevin J. 2023. Low rates of bacterivory enhances phototrophy and competitive advantage for mixoplankton growing in oligotrophic waters. Scientific Reports 13 (1) 10.1038/s41598-023-33962-x
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Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Caron, David A., Faure, Emile, Flynn, Kevin J., Gonçalves Leles, Suzana, Hansen, Per J., McManus, George B., Not, Fabrice, do Rosario Gomes, Helga, Santoferrara, Luciana, Stoecker, Diane K. and Tillmann, Urban 2023. The Mixoplankton Database - diversity of photo-phago-trophic plankton in form, function and distribution across the global ocean. The Journal of Eukaryotic Microbiology , e12972. 10.1111/jeu.12972
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Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Wilson, William H., Kimmance, Susan A., Clark, Darren R., Pelusi, Angela and Polimene, Luca 2022. 'Boom-and-busted' dynamics of phytoplankton-virus interactions explain the paradox of the plankton. New Phytologist 234 (3) , pp. 990-1002. 10.1111/nph.18042
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Glibert, Patricia M. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2022. From webs, loops, shunts, and pumps to microbial multitasking: evolving concepts of marine microbial ecology, the mixoplankton paradigm, and implications for a future ocean. Limnology and Oceanography 67 (3) , pp. 585-597. 10.1002/lno.12018
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Anschütz, Anna-A., Flynn, Kevin J. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2022. Acquired phototrophy and Its implications for bloom dynamics of the Teleaulax-Mesodinium-Dinophysis-Complex. Frontiers in Marine Science 8 , 799358. 10.3389/fmars.2021.799358
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Duarte Ferreira, G., Romano, F., Medic, N., Pitta, P., Hansen, P. J., Flynn, K. J., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and Calbet, A. 2021. Mixoplankton interferences in dilution grazing experiments. Scientific Reports 11 (1) , 23849. 10.1038/s41598-021-03176-0
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Flynn, K. J., Speirs, D. C., Heath, M. R. and Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 2021. Subtle differences in the representation of consumer dynamics have large effects in marine food web models. Frontiers in Marine Science 8 , 638892. 10.3389/fmars.2021.638892
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Flynn, Kevin John, Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Gilbert, Patricia and Smyth, Timothy 2021. Mixoplankton international workshop report. Presented at: MixITiN International Conference on Mixoplankton 2021, Cardiff, Wales, 19-20 January 2021. 10.5281/zenodo.5521009

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, Kevin J., Anestis, Konstantinos, Mansour, Joost S., Ferreira, Guilherme D. and Calbert, Albert 2021. Novel approaches for investigating marine planktonic mixotrophy. Zenodo. Available at: http://doi.org/10.5281/zenodo.5148500

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Hansen, Per Juel and Flynn, Kevin J. 2021. Seasonal distribution of non-constitutive mixoplankton across Arctic, temperate and Mediterranean coastal waters. Zenodo. 10.5281/zenodo.5055708

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Gypens, Nathalie, Hansen, Per Juel and Flynn, Kevin J., eds. 2021. A guide for field studies and environmental monitoring of mixoplankton populations. Zenodo. Available at: https://doi.org/10.5281/zenodo.5054916

Flynn, Kevin J. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2021. A simple N-based mixoplankton model; cockpit version.

Flynn, Kevin J., Kimmance, Susan A., Clark, Darren R., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Polimene, Lucy and Wilson, William H. 2021. Modelling the effects of traits and abiotic factors on viral lysis in phytoplankton. Frontiers in Marine Science 8 , 667184. 10.3389/fmars.2021.667184
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Goncalves Leles, Suzana, Bruggeman, Jorn, Polimere, Luca, Blackford, Jerry, Flynn, Kevin J. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2021. Differences in physiology explain succession of mixoplankton functional types and affect carbon fluxes in temperate seas. Progress in Oceanography 190 , 102481. 10.1016/j.pocean.2020.102481

Flynn, Kevin J. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2021. A simple n-based mixoplankton model. Zenodo.

Hansen, Per Juel, Flynn, Kevin John, Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Calbet, A., Saiz, Enric, Pitta, Paraskevi, Maselli, Maria, Medic, Nikola, Romano, Filomena and Traboni, Claudia 2021. A manual for isolation and culture of mixoplankton to support experimental studies.

Glibert, P.M., Beusen, A.H.W., Bouwman, A.F., Burkholder, J.M., Flynn, K.J., Heil, C.A., Li, M., Lin, C.-H.M., Madden, C.J., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Nardin, W., Silsbe, G., Song, Y. and Zhang, F. 2020. Multifaceted climatic change and nutrient effects on harmful algae require multifaceted models. Botana, Luis M., Louzao, M. Carmen and Vilarino, Natalia, eds. Climate Change and Marine and Freshwater Toxins, 2nd Edition, De Gruyter, pp. 473-518. (10.1515/9783110625738-012)

Hansen, P. J., Anderson, R., Stoecker, D. K., Decelle, J., Altenburger, A., Blossom, H. E., Drumm, K., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, K. J. 2019. Mixotrophy among freshwater and marine protists. Encyclopedia of Microbiology (Fourth Edition), Elsevier, pp. 199-210. (10.1016/B978-0-12-809633-8.20685-7)

Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Anestis, Konstantinos, Anschutz, Anna A., Calbet, Albert, Ferreira, Guilherme Duarte, Gypens, Nathalie, Hansen, Per J., John, Uwe, Martin, Jon Lapeyra, Mansour, Joost S., Maselli, Maira, Medic, Nikola, Norlin, Andreas, Not, Fabrice, Pitta, Paraskevi, Romano, Filomena, Enric, Saiz, Schneider, Lisa K., Wilem, Stolte and Traboni, Claudia 2019. Mixotrophic protists and a new paradigm for marine ecology: where does plankton research go now? Journal of Plankton Research 41 (4) , pp. 375-391. 10.1093/plankt/fbz026

Goncalves Leles, Suzana, Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, Kevin John, Tillmann, Urban, Stoecker, Diane, Jeong, Jae Jin, Burkholder, JoAnn, Hansen, Per Juel, Caron, David A., Gilbert, Patricia M., Hallegraeff, Gustaaf, Raven, John A., Sanders, Robert W. and Zubkov, Mikhail 2019. Sampling bias misrepresents the biogeographical significance of constitutive mixotrophs across global oceans. Global Ecology and Biogeography 28 (4) , pp. 418-428. 10.1111/geb.12853

Glibert, Patricia M., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, Kevin J., Hansen, Per Juel, Jeong, Hae Jin and Stoecker, Diane 2019. Plants are not animals and animals are not plants, right? Wrong! Tiny creatures in the ocean can be both at once! Frontiers for Young Minds 7 (48) 10.3389/frym.2019.00048
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Sandhu, S.K., Morozov, A.Y., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, K. 2019. Exploring nonlinear functional responses of zooplankton grazers in dilution experiments via optimization techniques. Limnology and Oceanography 64 (2) , pp. 774-784. 10.1002/lno.11073

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2019. Comment: Mixotrophic plankton - the perfect beasts of our oceans. Microbiology Today Magazine Oceans , pp. 47-48.

Gonçalves Leles, Suzana, Polimene, Luca, Bruggeman, Jorn, Blackford, Jeremy, Ciavatta, Stefano, Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, Kevin John 2018. Modelling mixotrophic functional diversity and implications for ecosystem function. Journal of Plankton Research 40 (6) , pp. 627-642. 10.1093/plankt/fby044

Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Bode, Antonio 2018. Toward a mechanistic understanding of trophic structure: Inferences from simulating stable isotope ratios. Marine Biology 165 (9) , -. 10.1007/s00227-018-3405-0
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Lin, Chih-Hsien, Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Glibert, Patricia M. 2018. Simulating effects of variable stoichiometry and temperature on mixotrophy in the harmful dinoflagellate karlodinium veneficum. Frontiers in Marine Science 5 , -. 10.3389/fmars.2018.00320
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Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 2018. The Perfect Beast. Scientific American 318 (4) , pp. 26-33. 10.1038/scientificamerican0418-26

Ghyoot, Caroline, Lancelot, Christiane, Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Gypens, Nathalie 2017. Introducing mixotrophy into a biogeochemical model describing an eutrophied coastal ecosystem: The Southern North Sea. Progress in Oceanography 157 , pp. 1-11. 10.1016/j.pocean.2017.08.002

Flynn, Kevin J., Kenny, Philip and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2017. Minimising losses to predation during microalgae cultivation. Journal of Applied Phycology 29 (4) , pp. 1829-1840. 10.1007/s10811-017-1112-8

Leles, S. G., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, K. J., Stoecker, D. K., Hansen, P. J., Calbet, A., McManus, G. B., Sanders, R. W., Caron, D. A., Not, F., Hallegraeff, G. M., Pitta, P., Raven, J. A., Johnson, M. D., Glibert, P. M. and Våge, S. 2017. Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proceedings of the Royal Society B: Biological Sciences 284 (1860) , 20170664. 10.1098/rspb.2017.0664

Ghyoot, Caroline, Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Lancelot, Christiane and Gypens, Nathalie 2017. Modeling plankton mixotrophy: A mechanistic model consistent with the shuter-type biochemical approach. Frontiers in Ecology and Evolution 5 , -. 10.3389/fevo.2017.00078
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Polimene, L., Sailley, S., Clark, D., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and Allen, J.I. 2017. Biological or microbial carbon pump? The role of phytoplankton stoichiometry in ocean carbon sequestration. Journal of Plankton Research 39 (2) , pp. 180-186. 10.1093/plankt/fbw091

Stoecker, D.K., Hansen, P.J., Caron, D.A. and Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 2017. Mixotrophy in the Marine Plankton. Annual Review of Marine Science 9 (1) , pp. 311-335. 10.1146/annurev-marine-010816-060617

Flynn, Kevin J. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2016. Why plankton modelers should reconsider using rectangular hyperbolic (Michaelis-Menten, Monod) descriptions of predator-prey interactions. Frontiers in Marine Science 3 , 165. 10.3389/fmars.2016.00165

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, Kevin J. 2016. Exploring the implications of the stoichiometric modulation of planktonic predation. Aquatic Microbial Ecology and Biogeochemistry: A Dual Perspective, Cham: Springer, pp. 77-89. (10.1007/978-3-319-30259-1_7)

Lundgren, Veronica M., Glibert, Patricia M., Granéli, Edena, Vidyarathna, Nayani K., Fiori, Emanuela, Ou, Linjian, Flynn, Kevin J., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Stoecker, Diane K. and Hansen, Per J. 2016. Metabolic and physiological changes in Prymnesium parvum when grown under, and grazing on prey of, variable nitrogen: Phosphorus stoichiometry. Harmful Algae 55 , pp. 1-12. 10.1016/j.hal.2016.01.002

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, Kevin J., Tillmann, Urban, Raven, John A., Caron, David, Stoecker, Diane K., Not, Fabrice, Hansen, Per J., Hallegraeff, Gustaaf, Sanders, Robert, Wilken, Susanne, McManus, George, Johnson, Mathew, Pitta, Paraskevi, Vågen, Selina, Berge, Terje, Calbet, Albert, Thingstad, Frede, Jeong, Hae Jin, Burkholder, JoAnn, Glibert, Patricia M., Graneli, Edna and Lundgren, Veronica 2016. Defining planktonic protist functional groups on mechanisms for energy and nutrient acquisition: Incorporation of diverse mixotrophic strategies. Protist 167 (2) , pp. 106-120. 10.1016/j.protis.2016.01.003
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Flynn, Kevin J., St John, Michael, Raven, John A., Skibinski, David O.F., Allen, J. Icarus, Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Hofmann, Eileen E. 2015. Acclimation, adaptation, traits and trade-offs in plankton functional type models: Reconciling terminology for biology and modelling. Journal of Plankton Research 37 (4) , pp. 683-691. 10.1093/plankt/fbv036

Flynn, Kevin J., Clark, Darren R., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Fabian, Heiner, Hansen, Per J., Glibert, Patricia M., Wheeler, Glen L., Stoecke, Diane K., Blackford, Jerry C. and Brownlee, Colin 2015. Ocean acidification with (de)eutrophication will alter future phytoplankton growth and succession. Proceedings of the Royal Society B: Biological Sciences 282 (1804) , 20142604. 10.1098/rspb.2014.2604
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Polimene, L., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Sailley, S.F., Ciavatta, S., Widdicombe, C.E., Atkinson, A. and Allen, J.I. 2015. Decrease in diatom palatability contributes to bloom formation in the Western English Channel. Progress in Oceanography 137 , pp. 484-497. 10.1016/j.pocean.2015.04.026

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Castellani, Claudia, Gentleman, Wendy C., Jónasdóttir, Sigrún H., Flynn, Kevin J., Bode, Antonio, Halsband, Claudia, Kuhn, Penelope, Licandro, Priscilla, Agersted, Mette D., Calbet, Albert, Lindeque, Penelope K., Koppelmann, Rolf, Møller, Eva F., Gislason, Astthor, Nielsen, Torkel Gissel and St. John, Michael 2014. Bridging the gap between marine biogeochemical and fisheries sciences; configuring the zooplankton link. Progress in Oceanography 129 (Part B) , pp. 176-199. 10.1016/j.pocean.2014.04.025
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Jiao, N., Robinson, C., Azam, F., Thomas, H., Baltar, F., Dang, H., Hardman-Mountford, N. J., Johnson, M., Kirchman, D. L., Koch, B. P., Legendre, L., Li, C., Liu, J., Luo, T., Luo, Y.-W., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Romanou, A., Tang, K., Wang, X., Zhang, C. and Zhang, R. 2014. Mechanisms of microbial carbon sequestration in the ocean – future research directions. Biogeosciences 11 (19) , pp. 5285-5306. 10.5194/bg-11-5285-2014
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Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, K. J., Burkholder, J. M., Berge, T., Calbet, A., Raven, J. A., Granéli, E., Glibert, P. M., Hansen, P. J., Stoecker, D. K., Thingstad, F., Tillmann, U., Väge, S., Wilken, S. and Zubkov, M. V. 2014. The role of mixotrophic protists in the biological carbon pump. Biogeosciences 11 (4) , pp. 995-1005. 10.5194/bg-11-995-2014
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Jiao, N., Robinson, C., Azam, F., Thomas, H., Baltar, F., Dang, H., Hardman-Mountford, N. J., Johnson, M., Kirchman, D. L., Koch, B. P., Legendre, L., Li, C., Liu, J., Luo, T., Luo, Y.-W., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Romanou, A., Tang, K., Wang, X., Zhang, C. and Zhang, R. 2014. Corrigendum to "Mechanisms of microbial carbon sequestration in the ocean - Future research directions" published in Biogeosciences, 11, 5285-5306, 2014. Biogeosciences 11 (19) , -. 10.5194/bg-11-5565-2014
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Sailley, S.F., Polimene, L., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Atkinson, A. and Allen, J.I. 2014. Impact of zooplankton food selectivity on plankton dynamics and nutrient cycling. Journal of Plankton Research 37 (3) , pp. 519-529. 10.1093/plankt/fbv020

St. John, M.A., Barange, M., Benway, H., Flynn, K.J., Holt, J., Merino, G., Martin, A., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Melle, W., Sanders, R., Trenkel, V.M., Grigorov, I. and Hoffman, E. 2014. Introduction to the BASIN special issue: State of art, past present a view to the future. Progress in Oceanography 129 (PB) , pp. 171-175. 10.1016/j.pocean.2014.11.007

Anderson, T. R., Hessen, D. O., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Mayor, D. J. and Yool, A. 2013. Sensitivity of secondary production and export flux to choice of trophic transfer formulation in marine ecosystem models. Journal of Marine Systems 125 , pp. 41-53. 10.1016/j.jmarsys.2012.09.008

Flynn, K. J., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Greenwell, H. C. and Sui, J. 2013. Monster potential meets potential monster: Pros and cons of deploying genetically modified microalgae for biofuels production. Interface Focus 3 (1) , 24427510. 10.1098/rsfs.2012.0037

Flynn, Kevin J., Stoecker, Diane K., Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331, Raven, John A., Glibert, Patricia M., Hansen, Per Juel, Granéli, Edna and Burkholder, Joann M. 2013. Misuse of the phytoplankton-zooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. Journal of Plankton Research 35 (1) , pp. 3-11. 10.1093/plankt/fbs062

Acheampong, E., Nielsen, M.H., Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and St. John, M.A. 2012. Towards an adaptive model for simulating growth of marine mesozooplankton: a macromolecular perspective. Ecological Modelling 225 , pp. 1-18. 10.1016/j.ecolmodel.2011.11.002

Anderson, Thomas R. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2010. Dysfunctionality in ecosystem models: an underrated pitfall? Progress in Oceanography 84 (1-2) , pp. 66-68. 10.1016/j.pocean.2009.09.007

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Davis, Cabell 2010. Defining the "to" in end-to-end models. Progress in Oceanography 84 (1-2) , pp. 39-42. 10.1016/j.pocean.2009.09.004

Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, K.J. 2010. Modelling mixotrophy in harmful algal blooms: More or less the sum of the parts? Journal of Marine Systems 83 (3-4) , pp. 158-169. 10.1016/j.jmarsys.2010.04.006

Flynn, Kevin J. and Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2009. Building the "perfect beast": modelling mixotrophic plankton. Journal of Plankton Research 31 (9) , pp. 965-992. 10.1093/plankt/fbp044

Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 2009. Are closure terms appropriate or necessary descriptors of zooplankton loss in nutrient-phytoplankton-zooplankton type models? Ecological Modelling 220 (5) , pp. 611-620. 10.1016/j.ecolmodel.2008.12.008

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, Kevin J. 2007. Importance of interactions between food quality, quantity, and gut transit time on consumer feeding, growth, and trophic dynamics. American Naturalist 169 (5) , pp. 632-646. 10.1086/513187

Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Flynn, K.J. and Fasham, M.J.R. 2007. Accounting for grazing dynamics in nitrogen-phytoplankton-zooplankton models. Limnology and Oceanography 52 (2) , pp. 649-661. 10.4319/lo.2007.52.2.0649

Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, K.J. 2006. Accounting for variation in prey selectivity by zooplankton. Ecological Modelling 199 (1) , pp. 82-92. 10.1016/j.ecolmodel.2006.06.013

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 2006. A multi-nutrient model for the description of stoichiometric modulation of predation in micro- and mesozooplankton. Journal of Plankton Research 28 (6) , pp. 597-611. 10.1093/plankt/fbi144

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, Kevin J. 2006. Promotion of harmful algal blooms by zooplankton predatory activity. Biology Letters 2 (2) , pp. 194-197. 10.1098/rsbl.2006.0447

Mitra, Aditee ORCID: https://orcid.org/0000-0001-5572-9331 and Flynn, Kevin J. 2005. Predator-prey interactions: is 'ecological stoichiometry' sufficient when good food goes bad? Journal of Plankton Research 27 (5) , pp. 393-399. 10.1093/plankt/fbi022

Mitra, A. ORCID: https://orcid.org/0000-0001-5572-9331, Davidson, K. and Flynn, K. J. 2003. The influence of changes in predation rates on marine microbial predator/prey interactions: A modelling study. Acta Oecologica 24 (Supple) , S359-S367. 10.1016/S1146-609X(03)00023-7

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