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Number of items: 10.

Cunningham-Oakes, Edward, Pointon, Tom, Murphy, Barry, Connor, Thomas R ORCID: https://orcid.org/0000-0003-2394-6504 and Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 2022. Novel application of metagenomics for the strain-level detection of bacterial contaminants within non-sterile industrial products – a 2 retrospective, real-time analysis. Microbial Genomics 8 (11) , 000884. 10.1099/mgen.0.000884
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Cunningham-Oakes, Edward, Pointon, Tom, Murphy, Barry, Campbell-Lee, Stuart, Webster, Gordon ORCID: https://orcid.org/0000-0002-9530-7835, Connor, Thomas R. ORCID: https://orcid.org/0000-0003-2394-6504 and Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 2021. Genomics reveals the novel species placement of industrial contaminant isolates incorrectly identified as Burkholderia lata. Microbial Genomics 7 (4) , 000564. 10.1099/mgen.0.000564
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Webster, Gordon ORCID: https://orcid.org/0000-0002-9530-7835, Mullins, Alex J. ORCID: https://orcid.org/0000-0001-5804-9008, Cunningham-Oakes, Edward, Renganathan, Arun, Aswathanarayan, Jamuna Bai, Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 and Vittal, Ravishankar Rai 2020. Culturable diversity of bacterial endophytes associated with medicinal plants of the Western Ghats, India. FEMS Microbiology Ecology 96 (1) , fiaa147. 10.1093/femsec/fiaa147
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Cunningham-Oakes, Edward 2020. The genomic basis of preservative resistance. PhD Thesis, Cardiff University.
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Cunningham-Oakes, Edward, Pointon, Tom, Murphy, Barry, Connor, Thomas R ORCID: https://orcid.org/0000-0003-2394-6504 and Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 2020. Genome sequence of pluralibacter gergoviae ECO77, a unique multireplicon isolate of industrial origin. Microbiology Resource Announcements 9 (9) , e01561-19. 10.1128/MRA.01561-19
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Cunningham-Oakes, Edward, Weiser, Rebecca ORCID: https://orcid.org/0000-0003-3983-3272, Pointon, Tom and Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 2019. Understanding the challenges of non-food industrial product contamination. FEMS Microbiology Letters 366 (23) , fnaa010. 10.1093/femsle/fnaa010
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Webster, Gordon ORCID: https://orcid.org/0000-0002-9530-7835, Mullins, Alex J ORCID: https://orcid.org/0000-0001-5804-9008, Bettridge, Aimee, Jones, Cerith ORCID: https://orcid.org/0000-0001-6275-0235, Cunningham-Oakes, Edward, Connor, Thomas R ORCID: https://orcid.org/0000-0003-2394-6504, Parkhill, Julian and Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 2019. Genome sequences of three Paraburkholderia spp. strains isolated from Wood-decay fungi reveals them as novel taxa with antimicrobial biosynthetic potential. Microbiology Resource Announcements 8 (34) , e00778-19. 10.1128/MRA.00778-19
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Weiser, Rebecca ORCID: https://orcid.org/0000-0003-3983-3272, Green, Angharad E., Bull, Matthew J., Cunningham-Oakes, Edward, Jolley, Keith A., Maiden, Martin C.J., Hall, Amanda J., Winstanley, Craig, Weightman, Andrew J. ORCID: https://orcid.org/0000-0002-6671-2209, Donoghue, Denise, Amezquita, Alejandro, Connor, Thomas R. ORCID: https://orcid.org/0000-0003-2394-6504 and Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 2019. Not all Pseudomonas aeruginosa are equal: strains from industrial sources possess uniquely large multireplicon genomes. Microbial Genomics , 000276. 10.1099/mgen.0.000276
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Webster, Gordon ORCID: https://orcid.org/0000-0002-9530-7835, Mullins, Alex J ORCID: https://orcid.org/0000-0001-5804-9008, Watkins, Andrew J, Cunningham-Oakes, Edward, Weightman, Andrew J ORCID: https://orcid.org/0000-0002-6671-2209, Mahenthiralingam, Eshwar ORCID: https://orcid.org/0000-0001-9014-3790 and Sass, Henrik ORCID: https://orcid.org/0000-0001-8740-4224 2019. Genome sequences of two choline-utilising methanogenic archaea, Methanococcoides spp., isolated from marine sediments. Microbiology Resource Announcements 8 (18) , e00342-19. 10.1128/MRA.00342-19
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Beaton, Ainsley, Lood, Cédric, Cunningham-Oakes, Edward, MacFadyen, Alison, Mullins, Alex J. ORCID: https://orcid.org/0000-0001-5804-9008, Bestawy, Walid E.l., Botelho, João, Chevalier, Sylvie, Coleman, Shannon, Dalzell, Chloe, Dolan, Stephen K., Faccenda, Alberto, Ghequire, Maarten G. K., Higgins, Steven, Kutschera, Alexander, Murray, Jordan, Redway, Martha, Salih, Talal, da Silva, Ana C., Smith, Brian A., Smits, Nathan, Thomson, Ryan, Woodcock, Stuart, Welch, Martin, Cornelis, Pierre, Lavigne, Rob, van Noort, Vera and Tucker, Nicholas P. 2018. Community-led comparative genomic and phenotypic analysis of the aquaculture pathogen Pseudomonas baetica a390T sequenced by Ion semiconductor and Nanopore technologies. FEMS Microbiology Letters 365 (9) , fny069. 10.1093/femsle/fny069
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