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Number of items: 103.

Chopard, Daphné, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasić, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2024. Word sense disambiguation of acronyms in clinical narratives. Frontiers in Digital Health 6 , 1282043. 10.3389/fdgth.2024.1282043
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Liao, Yuxiang, Liu, Hantao ORCID: https://orcid.org/0000-0003-4544-3481 and Spasić, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2024. Fine-tuning coreference resolution for different styles of clinical narratives. Journal of Biomedical Informatics 149 , 104578. 10.1016/j.jbi.2023.104578
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Liao, Yuxiang, Liu, Hantao ORCID: https://orcid.org/0000-0003-4544-3481 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2024. RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives (version 1.0.0). [Online]. PhysioNet. Available at: https://doi.org/10.13026/z67q-xy65

Balaneji, Farshid, Maringer, Dietmar and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2024. The power of words: predicting stock market returns with fine-grained sentiment analysis and XGBoost. Presented at: Intelligent Systems Conference (IntelliSys), Amsterdam, The Netherlands, 7-8 September 2023. Published in: Arai, Kohei ed. Intelligent Systems and Applications. Lecture Notes in Networks and Systems , vol.1 (822) Springer Nature, pp. 577-596. 10.1007/978-3-031-47721-8_39

Miok, Kristian, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2023. The value of numbers in clinical text classification. Machine Learning and Knowledge Extraction 5 (3) , pp. 746-762. 10.3390/make5030040
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Edmunds, Grace, Beck, Sam, Umakant Kale, Kedar, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, O'Neill, Dan, Brodbelt, David and Smalley, Matthew J ORCID: https://orcid.org/0000-0001-9540-1146 2023. Associations between dog breed and clinical features of mammary epithelial neoplasia in bitches: an epidemiological study of submissions to a single diagnostic pathology centre between 2008-2021. Journal of Mammary Gland Biology and Neoplasia 28 (6) 10.1007/s10911-023-09531-3
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Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2023. Self-supervised representation learning for geographical data - a systematic literature review. ISPRS International Journal of Geo-Information 12 (2) , 64. 10.3390/ijgi12020064
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Liao, Yuxiang, Liu, Hantao ORCID: https://orcid.org/0000-0003-4544-3481 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2023. Deep learning approaches to automatic radiology report generation: A systematic review. Informatics in Medicine Unlocked 39 , 101273. 10.1016/j.imu.2023.101273
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Tong, Yanzhang, Liang, Yan, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Hicks, Yulia ORCID: https://orcid.org/0000-0002-7179-4587, Hu, Huicong and Liu, Ying ORCID: https://orcid.org/0000-0001-9319-5940 2022. A data-driven approach for integrating hedonic quality and pragmatic quality in user experience modelling. Journal of Computing and Information Science in Engineering 22 (6) , 061002. 10.1115/1.4054155

Tong, Yanzhang, Liang, Yan, Liu, Ying ORCID: https://orcid.org/0000-0001-9319-5940, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Hicks, Yulia ORCID: https://orcid.org/0000-0002-7179-4587 2022. Understanding context of use from online customer reviews using BERT. Presented at: IEEE 18th International Conference on Automation Science and Engineering (CASE 2022), Mexico City, Mexico, 20-24 August 2022. 2022 IEEE 18th International Conference on Automation Science and Engineering (CASE). IEEE, 10.1109/CASE49997.2022.9926649

Rogers, David, Preece, Alun ORCID: https://orcid.org/0000-0003-0349-9057, Innes, Martin ORCID: https://orcid.org/0000-0002-8950-8147 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2022. Real-time text classification of user-generated content on social media: Systematic review. IEEE Transactions on Computational Social Systems 9 (4) , pp. 1154-1166. 10.1109/TCSS.2021.3120138
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Zunic, Anastazia, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2022. The case of aspect in sentiment analysis: seeking attention or co-dependency? Machine Learning and Knowledge Extraction 4 (2) , pp. 474-487. 10.3390/make4020021
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Filimonov, Maxim, Chopard, Daphne and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2022. Simulation and annotation of global acronyms. Bioinformatics 38 (11) , pp. 3136-3138. 10.1093/bioinformatics/btac298
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Chopard, Daphne, Treder, Matthias ORCID: https://orcid.org/0000-0001-5955-2326, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385, Johnson, Claire, Busse-Morris, Monica ORCID: https://orcid.org/0000-0002-5331-5909 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. Text mining of adverse events in clinical trials: Deep learning approach. JMIR Medical Informatics 9 (12) , e28632. 10.2196/28632
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Muralidaran, Vignesh, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 2021. A systematic review of unsupervised approaches to grammar induction. Natural Language Engineering 27 (6) , pp. 647-689. 10.1017/S1351324920000327

Tong, Yanzhang, Liang, Yan, Liu, Ying ORCID: https://orcid.org/0000-0001-9319-5940, Hicks, Yulia ORCID: https://orcid.org/0000-0002-7179-4587 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. Integrating hedonic quality for user experience modelling. Presented at: ASME IDETC/CIE 2021, Virtual, 17-20 August 2021. 41st Computers and Information in Engineering Conference (CIE) Proceedings. , vol.2 ASME, 10.1115/DETC2021-69781
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Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502, Loizides, Fernando ORCID: https://orcid.org/0000-0003-0531-6760, Neale, Steven, Anthony, Laurence and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. Developing computational infrastructure for the CorCenCC corpus - the National Corpus of Contemporary Welsh. Language Resources and Evaluation 55 , pp. 789-816. 10.1007/s10579-020-09501-9
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Zunic, Anastazia, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. Aspect-based sentiment analysis with graph convolution over syntactic dependencies. Artificial Intelligence in Medicine 119 , 102138. 10.1016/j.artmed.2021.102138
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Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385, Palmer, Geraint ORCID: https://orcid.org/0000-0001-7865-6964, Arman, Laura ORCID: https://orcid.org/0000-0002-2517-845X, Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. Creating Welsh language word embeddings. Applied Sciences 11 (15) , 6896. 10.3390/app11156896
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Espinosa-Anke, Luis ORCID: https://orcid.org/0000-0001-6830-9176, Palmer, Geraint ORCID: https://orcid.org/0000-0001-7865-6964, Filimonov, Maxim, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 2021. English–Welsh cross-lingual embeddings. Applied Sciences 11 (14) , 6541. 10.3390/app11146541
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Dunphy, Emma, Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Hamilton, Fiona, Williams, Jodie, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Murray, Elizabeth 2021. Feasibility randomised controlled trial comparing TRAK-ACL digital rehabilitation intervention plus treatment as usual versus treatment as usual for patients following anterior cruciate ligament reconstruction. BMJ Open Sport and Exercise Medicine 7 (2) , e001002. 10.1136/bmjsem-2020-001002
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Setchi, Rossitza ORCID: https://orcid.org/0000-0002-7207-6544, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Morgan, Jeffrey, Harrison, Christopher and Corken, Richard 2021. Artificial intelligence for patent prior art searching. World Patent Information 64 , 102021. 10.1016/j.wpi.2021.102021
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Hughes, Callum, Filimonov, Maxim, Wray, Alison ORCID: https://orcid.org/0000-0002-2144-4458 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. Leaving no stone unturned: flexible retrieval of idiomatic expressions from a large text corpus. Machine Learning and Knowledge Extraction 3 (1) , pp. 263-283. 10.3390/make3010013
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Palmer, Geraint ORCID: https://orcid.org/0000-0001-7865-6964, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385, Arman, Laura ORCID: https://orcid.org/0000-0002-2517-845X, Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. A closer look at Welsh word embeddings. Prys, Delyth, ed. Language and Technology in Wales: Volume 1, Bangor: Bangor University, pp. 21-29.
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Muralidaran, Vigneshwaran, Palmer, Geraint ORCID: https://orcid.org/0000-0001-7865-6964, Arman, Laura ORCID: https://orcid.org/0000-0002-2517-845X, O'Hare, Keziah, Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2021. A practical implementation of a porter stemmer for Welsh. Prys, Delyth, ed. Language and Technology in Wales: Volume 1, Bangor: Bangor University, pp. 30-43.
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 2020. Patient triage by topic modelling of referral letters: Feasibility study. JMIR Medical Informatics 8 (11) , e21252. 10.2196/21252
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Muralidaran, Vigneshwaran, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 2020. A cognitive approach to parsing with neural networks. Presented at: International Conference on Statistical Language and Speech Processing (SLSP), Cardiff, UK, 14–16 Oct 2020. Statistical Language and Speech Processing. Lecture Notes in Computer Science. , vol.12379 Springer Verlag, pp. 71-84. 10.1007/978-3-030-59430-5_6

Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Groom, Quentin, Hardisty, Alex ORCID: https://orcid.org/0000-0002-0767-4310, Leegwater, Thijs, Livermore, Laurence, van Walsum, Myriam, Wijkamp, Noortje and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2020. Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections.[Version 2]. Research Ideas and Outcomes 6 , e58030. 10.3897/rio.6.e58030
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Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Livermore, Laurence, Groom, Quentin, Hardisty, Alex ORCID: https://orcid.org/0000-0002-0767-4310, Leegwater, Thijs, van Walsum, Myriam, Wijkamp, Noortje and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2020. Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections [Version 1]. Research Ideas and Outcomes 6 , e55789. 10.3897/rio.6.e55789
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Williams, Lowri and Buerki, Andreas ORCID: https://orcid.org/0000-0003-2151-3246 2020. Idiom–based features in sentiment analysis: cutting the Gordian knot. IEEE Transactions on Affective Computing 11 (2) 10.1109/TAFFC.2017.2777842
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Setchi, Rossi ORCID: https://orcid.org/0000-0002-7207-6544 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2020. AI-assisted patent prior art searching - feasibility study. The Intellectual Property Office. Available at: https://www.gov.uk/government/publications/ai-assi...
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Nenadic, Goran 2020. Clinical text data in machine learning: Systematic review. JMIR Medical Informatics 8 (3) , e17984. 10.2196/17984
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Uzuner, Özlem and Zhou, Li 2020. Emerging clinical applications of text analytics. International Journal of Medical Informatics 134 , 103974. 10.1016/j.ijmedinf.2019.103974

Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Playle, Rebecca ORCID: https://orcid.org/0000-0002-2989-1092, Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Lau, Mandy ORCID: https://orcid.org/0000-0001-5894-570X, Hannaway, Liam and Jones, Stephen 2020. Using routine referral data for patients with knee and hip pain to improve access to specialist care. BMC Musculoskeletal Disorders 21 , 66. 10.1186/s12891-020-3087-x
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Zunic, Anastazia, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2020. Sentiment analysis in health and wellbeing: A systematic review. JMIR Medical Informatics 8 (1) , e16023. 10.2196/16023

Dai, Xiangfeng, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Chapman, Samuel and Meyer, Bradley 2020. The state of the art in implementing machine learning for mobile apps: A survey. Presented at: IEEE SoutheastCon, Raleigh, USA, 12-15 Mar 2020. -.

Zunic, Anastazia, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2020. Improving the performance of sentiment analysis in health and wellbeing using domain knowledge. Presented at: the Third UK Healthcare Text Analytics Conference (HealTAC), London, UK, 22-24 April 2020. -.

Espinosa-Anke, Luis ORCID: https://orcid.org/0000-0001-6830-9176, Martin-Vide, Carlos and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, eds. 2020. Statistical language and speech processing: 8th International Conference, SLSP 2020, Cardiff, UK, October 14–16, 2020. Springer.

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Krzeminski, Dominik, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 and Balinsky, Alexander ORCID: https://orcid.org/0000-0002-8151-4462 2019. Cohort selection for clinical trials from longitudinal patient records: text mining approach. JMIR Medical Informatics 7 (4) , e15980. 10.2196/15980
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Smith, Andrew ORCID: https://orcid.org/0000-0001-8805-8028 and Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 2019. KLOSURE: Closing in on open–ended patient questionnaires with text mining. Journal of Biomedical Semantics 10 (S1) , 24. 10.1186/s13326-019-0215-3
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Williams, Lowri, Arribas-Ayllon, Michael ORCID: https://orcid.org/0000-0003-2669-2781, Artemiou, Andreas ORCID: https://orcid.org/0000-0002-7501-4090 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2019. Comparing the utility of different classification schemes for emotive language analysis. Journal of Classification 36 (3) , pp. 619-648. 10.1007/s00357-019-9307-0
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Chopard, Daphne and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2019. A deep learning approach to self-expansion of abbreviations based on morphology and context distance. Presented at: SLSP 2019: 7th International Conference on Statistical Language and Speech Processing, Ljubljana, Slovenia, 14-16 October 2019. Published in: Martín-Vide, Carlos, Purver, Matthew and Pollak, Senja eds. Statistical Language and Speech Processing: 7th International Conference, SLSP 2019, Ljubljana, Slovenia, October 14–16, 2019, Proceedings. , vol.11816 Springer, pp. 71-82. 10.1007/978-3-030-31372-2_6

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 and Artemiou, Andreas ORCID: https://orcid.org/0000-0002-7501-4090 2019. Unsupervised multi-word term recognition in Welsh. Presented at: Celtic Language Technology Workshop 2019, Dublin, Ireland, 19 August 2019. Published in: Lynn, Teresa, Prys, Delyth, Batchelor, Colin and Tyers, Francis eds. Proceedings of the Celtic Language Technology Workshop. European Association for Machine Translation,
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Dai, Xiangfeng, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Meyer, Bradley, Chapman, Samuel and Andres, Frederic 2019. Machine learning on mobile: An on-device inference app for skin cancer detection. Presented at: 2019 4th International Conference on Fog and Mobile Edge Computing, Rome, Italy, 10-13 June 2019. 2019 Fourth International Conference on Fog and Mobile Edge Computing (FMEC). IEEE, pp. 301-305. 10.1109/FMEC.2019.8795362

Nieva De La Hidalga, Abraham ORCID: https://orcid.org/0000-0001-7348-7612, Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Rosin, Paul ORCID: https://orcid.org/0000-0002-4965-3884 and Sun, Xianfang ORCID: https://orcid.org/0000-0002-6114-0766 2019. Use of semantic segmentation for increasing the throughput of digitisation workflows for natural history collections. Presented at: Biodiversity_Next 2019, Leiden, The Netherlands, 21-25 October 2019. Biodiversity Information Science and Standards. , vol.3 (e37161) Pensoft, 10.3897/biss.3.37161
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Hannah, Charlotte, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 2018. A computational model of pedestrian road safety: the long way round is the safe way home. Accident Analysis & Prevention 121 , pp. 347-357. 10.1016/j.aap.2018.06.004
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Bannister, Christian A. ORCID: https://orcid.org/0000-0001-8558-9480, Halcox, Julian P., Currie, Craig J., Preece, Alun ORCID: https://orcid.org/0000-0003-0349-9057 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2018. A genetic programming approach to development of clinical prediction models: a case study in symptomatic cardiovascular disease. PLoS ONE 13 (9) , e0202685. 10.1371/journal.pone.0202685
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Hannah, Charlotte, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385 2018. Modelling pedestrian safety with respect to road traffic crashes by estimating the safety of paths. Presented at: GIScience Research UK Conference, Leicester, England, 18-20 April 2018.
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Corcoran, Padraig ORCID: https://orcid.org/0000-0001-9731-3385, Gagarin, Andrei ORCID: https://orcid.org/0000-0001-9749-9706 and Buerki, Andreas ORCID: https://orcid.org/0000-0003-2151-3246 2018. Head to head: Semantic similarity of multi-word terms. IEEE Access 6 , pp. 20545-20557. 10.1109/ACCESS.2018.2826224
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Smith, Andrew ORCID: https://orcid.org/0000-0001-8805-8028 and Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 2018. Closing in on open-ended patient questionnaires with text mining. Presented at: UK Healthcare Text Analytics Conference (HealTAC), Manchester, UK, 18-19 April 2018.
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Preece, Alun ORCID: https://orcid.org/0000-0003-0349-9057, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Evans, Kieran ORCID: https://orcid.org/0000-0003-0414-0812, Rogers, David, Webberley, William, Roberts, Colin ORCID: https://orcid.org/0000-0003-0595-2740 and Innes, Martin ORCID: https://orcid.org/0000-0002-8950-8147 2018. Sentinel: a co-designed platform for semantic enrichment of social media streams. IEEE Transactions on Computational Social Systems 5 (1) , pp. 118-131. 10.1109/TCSS.2017.2763684
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2018. Acronyms as an integral part of multi–word term recognition - A token of appreciation. IEEE Access 6 , pp. 8351-8363. 10.1109/ACCESS.2018.2807122
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Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Nicholas, Kevin ORCID: https://orcid.org/0000-0001-6924-9291, Busse-Morris, Monica ORCID: https://orcid.org/0000-0002-5331-5909, Collins, Mark and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2018. Integrating self-management support for knee injuries into routine clinical practice: TRAK intervention design and delivery. Musculoskeletal Science and Practice 33 , pp. 53-60. 10.1016/j.msksp.2017.11.002
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Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Owen, David ORCID: https://orcid.org/0000-0002-4028-0591, Lau, Tin ORCID: https://orcid.org/0000-0001-5894-570X, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Playle, Rebecca ORCID: https://orcid.org/0000-0002-2989-1092, Hannaway, Liam and Jones, Stephen 2018. Improving access to care and treatment for patients with hip and knee pain at the interface between primary and secondary care. Presented at: OARSI 2018 World Congress on Osteoarthritis, Liverpool, UK, 26-29 April 2018.

Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Nicholas, Kevin ORCID: https://orcid.org/0000-0001-6924-9291, Busse-Morris, Monica ORCID: https://orcid.org/0000-0002-5331-5909, Collins, M. and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2018. An evaluation of TRAK physiotherapy self management intervention development and delivery for knee conditions. Presented at: OARSI 2018 World Congress on Osteoarthritis, Liverpool, 26-29 April 2018. -.

Dunphy, Emma, Hamilton, Fiona, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 2017. Acceptability of a digital healthintervention alongside physiotherapy to support patients following anterior cruciateligament reconstruction. BMC Musculoskeletal Disorders 18 , 471. 10.1186/s12891-017-1846-0
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Neale, Steven, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Needs, Jennifer, Watkins, Gareth, Morris, Steve, Fitzpatrick, Teresa, Marshall, L and Knight, Dawn ORCID: https://orcid.org/0000-0002-4745-6502 2017. The CorCenCC crowdsourcing app: a bespoke tool for the user-driven creation of the national corpus of contemporary Welsh. Presented at: The 9th International Corpus Linguistics Conference, Birmingham, UK, 24-28 July 2017.

Dai, Xiangfeng, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Andres, Frederic 2017. A framework for automated rating of online reviews against the underlying topics. Presented at: ACM Southeast Conference, Kennesaw State University, Georgia, USA, 13-15 April 2017. ACM SE '17 Proceedings of the SouthEast Conference. New York: ACM, pp. 164-167. 10.1145/3077286.3077291
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Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2016. Web based interventions for self-management of rehabilitation. Presented at: Enhanced Recovery after Surgery (ERAS) UK Conference, Cardiff, UK, 4th November.

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Divoli, Anna, Gupta, Satyam, Pataky, Tamas, Pizzocaro, Diego, Preece, Alun ORCID: https://orcid.org/0000-0003-0349-9057, Van Deursen, Robert ORCID: https://orcid.org/0000-0002-9461-0111 and Wilson, Christopher 2015. TRAK App Suite: A web-based intervention for delivering standard care for the rehabilitation of knee conditions. JMIR Research Protocols 4 (4) , e122. 10.2196/resprot.4091

Williams, Lowri, Bannister, Christian ORCID: https://orcid.org/0000-0001-8558-9480, Arribas-Ayllon, Michael ORCID: https://orcid.org/0000-0003-2669-2781, Preece, Alun ORCID: https://orcid.org/0000-0003-0349-9057 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2015. The role of idioms in sentiment analysis. Expert Systems with Applications 42 (21) , pp. 7375-7385. 10.1016/j.eswa.2015.05.039
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Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Roos, Paulien E. ORCID: https://orcid.org/0000-0003-3027-3432, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Adamson, Paul ORCID: https://orcid.org/0000-0003-3019-8831 and Van Deursen, Robert William Martin ORCID: https://orcid.org/0000-0002-9461-0111 2015. The clinical effectiveness of self-care interventions with an exercise component to manage knee conditions: a systematic review. The Knee 22 (5) , pp. 360-371. 10.1016/j.knee.2015.05.003
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Moore, S. C., Alam, M. F., Cohen, D., Hood, K. ORCID: https://orcid.org/0000-0002-5268-8631, Huang, C., Murphy, S. ORCID: https://orcid.org/0000-0003-3589-3681, Playle, R. ORCID: https://orcid.org/0000-0002-2989-1092, Moore, L., Shepherd, J. ORCID: https://orcid.org/0000-0001-6466-2298, Sivarajasingam, V. ORCID: https://orcid.org/0000-0003-3541-592X, Spasic, I. ORCID: https://orcid.org/0000-0002-8132-3885, Stanton, H. and Williams, A. ORCID: https://orcid.org/0000-0002-4737-219X 2015. All-Wales Licensed Premises Intervention (AWLPI): a randomised controlled trial of an intervention to reduce alcohol-related violence. Public Health Research 3 (10) 10.3310/phr03100
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Zhao, Bo ORCID: https://orcid.org/0000-0002-3799-9183, Jones, Christopher B. ORCID: https://orcid.org/0000-0001-6847-7575 and Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 2015. KneeTex: An ontology-driven system for information extraction from MRI reports. Journal of Biomedical Semantics 6 , 34. 10.1186/s13326-015-0033-1
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Divoli, Anna, Gupta, Satyam Kumar, Pataky, Tamas, Pizzocaro, Diego ORCID: https://orcid.org/0000-0003-1976-8805, Preece, Alun David ORCID: https://orcid.org/0000-0003-0349-9057, Van Deursen, Robert William Martin ORCID: https://orcid.org/0000-0002-9461-0111 and Wilson, Chris 2015. TRAK application suite: A web-based intervention for delivering standard care for the rehabilitation of knee conditions. JMIR Research Protocols 4 (4) , e122. 10.2196/resprot.4091
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Evans, Kieran ORCID: https://orcid.org/0000-0003-0414-0812, Trnkoczy, Jernej, Suciu, George, Suciu, Victor, Martin, Paul, Wang, Junchao, Zhao, Zhiming, Jones, Andrew Clifford, Preece, Alun David ORCID: https://orcid.org/0000-0003-0349-9057, Quevedo Fernandez, Francisco, Rogers, David, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Taylor, Ian, Stankovski, Vlado and Taherizadeh, Salman 2015. Dynamically reconfigurable workflows for time-critical applications. Presented at: SC15: The International Conference for High Performance Computing, Networking, Storage, and Analysis, New York City, NY, USA, 16-19 November 2015. WORKS '15 Proceedings of the 10th Workshop on Workflows in Support of Large-Scale Science. pp. 1-10. 10.1145/2822332.2822339

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Livsey, Jacqueline, Keane, John A. and Nenadic, Goran 2014. Text mining of cancer-related information: review of current status and future directions. International Journal of Medical Informatics 83 (9) , pp. 605-623. 10.1016/j.ijmedinf.2014.06.009

Bhachu, Lakhveer, Soldatova, Larisa, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901 2014. Mobile application KneeCare to support knee rehabilitation. Presented at: Science and Information Conference (SAI), London, UK, 27-29 August 2014.

Bannister, C. A. ORCID: https://orcid.org/0000-0001-8558-9480, Currie, C. J., Preece, A. ORCID: https://orcid.org/0000-0003-0349-9057 and Spasic, I. ORCID: https://orcid.org/0000-0002-8132-3885 2014. Automatic development of clinical prediction models with genetic programming: A case study in cardiovascular disease. Value in Health 17 (3) , A200-A201. 10.1016/j.jval.2014.03.1171

Bannister, Christian ORCID: https://orcid.org/0000-0001-8558-9480, Poole, Christopher David, Jenkins-Jones, Sara, Morgan, Christopher L., Elwyn, Glyn ORCID: https://orcid.org/0000-0002-0917-6286, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Currie, Craig John 2014. External validation of the UKPDS risk engine in incident type 2 diabetes: a need for new type 2 diabetes-specific risk equations. Diabetes Care 37 (2) , pp. 537-545. 10.2337/dc13-1159
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Moore, Simon Christopher, O'Brien, Claire, Alam, Mohammed, Cohen, David, Hood, Kerenza ORCID: https://orcid.org/0000-0002-5268-8631, Huang, Chao, Moore, Laurence Anthony Russell, Murphy, Simon ORCID: https://orcid.org/0000-0003-3589-3681, Playle, Rebecca Anne ORCID: https://orcid.org/0000-0002-2989-1092, Sivarajasingam, Vaseekaran ORCID: https://orcid.org/0000-0003-3541-592X, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Williams, Anne ORCID: https://orcid.org/0000-0002-4737-219X and Shepherd, Jonathan Paul ORCID: https://orcid.org/0000-0001-6466-2298 2014. All-Wales licensed premises intervention (AWLPI): a randomised controlled trial to reduce alcohol-related violence. BMC Public Health 14 (1) , -. 10.1186/1471-2458-14-21
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Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Greenwood, Mark, Preece, Alun David ORCID: https://orcid.org/0000-0003-0349-9057, Francis, Nicholas Andrew ORCID: https://orcid.org/0000-0001-8939-7312 and Elwyn, Glyn ORCID: https://orcid.org/0000-0002-0917-6286 2013. FlexiTerm: a flexible term recognition method. Journal of Biomedical Semantics 4 , 27. 10.1186/2041-1480-4-27
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Greenwood, Mark, Elwyn, Glyn ORCID: https://orcid.org/0000-0002-0917-6286, Francis, Nicholas Andrew ORCID: https://orcid.org/0000-0001-8939-7312, Preece, Alun David ORCID: https://orcid.org/0000-0003-0349-9057 and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2013. Automatic extraction of personal experiences from patients' blogs: A case study in chronic obstructive pulmonary disease. Presented at: Third International Conference on Social Computing and its Applications, Karlsruhe, Germany, 30th September - 2nd October 2013.

Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Van Deursen, Robert William Martin ORCID: https://orcid.org/0000-0002-9461-0111, Soldatova, Larisa and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2013. TRAK ontology: defining standard care for the rehabilitation of knee conditions. Journal of Biomedical Informatics 46 (4) , pp. 615-625. 10.1016/j.jbi.2013.04.009

Button, Kate ORCID: https://orcid.org/0000-0003-1073-9901, Roos, Paulien E. ORCID: https://orcid.org/0000-0003-3027-3432, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Pataky, Tamas and Van Deursen, Robert William Martin ORCID: https://orcid.org/0000-0002-9461-0111 2013. Development of iKnee: A web based application using biomechanical data to optomize knee rehabilitation within the home environment. Presented at: The 32nd Scientific Meeting of the Physiotherapy Research Society, Cardiff, UK, 9 April 2013.

Smallbone, Kieran, Messiha, Hanan L., Carroll, Kathleen M., Winder, Catherine L., Malys, Naglis, Dunn, Warwick B., Murabito, Ettore, Swainston, Neil, Dada, Joseph O., Khan, Farid, Pir, Pınar, Simeonidis, Evangelos, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Wishart, Jill, Weichart, Dieter, Hayes, Neil W., Jameson, Daniel, Broomhead, David S., Oliver, Stephen G., Gaskell, Simon J., McCarthy, John E. G., Paton, Norman W., Westerhoff, Hans V., Kell, Douglas B. and Mendes, Pedro 2013. A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes. FEBS Letters 587 (17) , pp. 2832-2841. 10.1016/j.febslet.2013.06.043

Burnap, Peter ORCID: https://orcid.org/0000-0003-0396-633X, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Gray, William Alexander, Hilton, Jeremy Charles, Rana, Omer Farooq ORCID: https://orcid.org/0000-0003-3597-2646 and Elwyn, Glyn ORCID: https://orcid.org/0000-0002-0917-6286 2012. Protecting patient privacy in distributed collaborative healthcare environments by retaining access control of shared information. Presented at: 2012 International Conference on Collaboration Technologies and Systems (CTS), Denver, CO, USA, 21-25 May 2012. Published in: Smari, Waleed W. and Charles, Fox eds. 2012 International Conference on Collaboration Technologies and Systems (CTS). , vol.14 Los Alamitos, CA: IEEE, pp. 490-497. 10.1109/CTS.2012.6261095

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Burnap, Peter ORCID: https://orcid.org/0000-0003-0396-633X, Greenwood, Mark and Arribas-Ayllon, Michael ORCID: https://orcid.org/0000-0003-2669-2781 2012. A naïve Bayes approach to classifying topics in suicide notes. Biomedical Informatics Insights 5 (Supp 1) , pp. 87-97. 10.4137/BII.S8945

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Sarafraz, Farzaneh, Keane, John A. and Nenadic, Goran 2010. Medication information extraction with linguistic pattern matching and semantic rules. Journal of the American Medical Informatics Association 17 (5) , pp. 532-535. 10.1136/jamia.2010.003657

Dada, Joseph O., Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Paton, Norman W. and Mendes, Pedro 2010. SBRML: a markup language for associating systems biology data with models. Bioinformatics 26 (7) , pp. 932-938. 10.1093/bioinformatics/btq069

Swainston, Neil, Jameson, Daniel, Li, Peter, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Mendes, Pedro and Paton, Norman W. 2010. Integrative information management for systems biology. Lecture Notes in Computer Science 6254 , pp. 164-178. 10.1007/978-3-642-15120-0_13

Masseroli, Marco, Paton, Norman W. and Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 2010. Chapter 15: Search Computing and the Life Sciences. Lecture Notes in Computer Science 5950 , pp. 291-306. 10.1007/978-3-642-12310-8_15

Li, P., Dada, J. O., Jameson, D., Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Swainston, N., Carroll, K., Dunn, W., Khan, F., Malys, N., Messiha, H. L., Simeonidis, E., Weichart, D., Winder, C., Wishart, J., Broomhead, D. S., Goble, C. A., Gaskell, S. J., Kell, D. B., Westerhoff, H. V., Mendes, P. and Paton, N. W. 2010. Systematic integration of experimental data and models in systems biology. BMC Bioinformatics 11 , 582. 10.1186/1471-2105-11-582
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Brown, Marie, Dunn, Warwick B., Dobson, P., Patel, Y., Winder, C. L., Francis-McIntyre, S., Begley, P., Carroll, K., Broadhurst, D., Tseng, A., Swainston, N., Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Goodacre, Royston and Kell, Douglas B. 2009. Mass spectrometry tools and metabolite-specific databases for molecular identification in metabolomics. Analyst 134 (7) , pp. 1322-1332. 10.1039/b901179j

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Simeonidis, Evangelos, Messiha, Hanan L., Paton, Norman W. and Kell, Douglas B. 2009. KiPar, a tool for systematic information retrieval regarding parameters for kinetic modelling of yeast metabolic pathways. Bioinformatics 25 (11) , pp. 1404-1411. 10.1093/bioinformatics/btp175

Yang, Hui, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Keane, John A. and Nenadic, Goran 2009. A Text Mining Approach to the Prediction of Disease Status from Clinical Discharge Summaries. Journal of The American Medical Informatics Association 16 (4) , pp. 596-600. 10.1197/jamia.M3096

Yang, H., Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Keane, J. A. and Nenadic, G. 2009. A Text Mining Approach to the Prediction of Disease Status from Clinical Discharge Summaries. JAMIA Journal of the American Medical Informatics Assocation 16 (4) , pp. 596-600. 10.1197/jamia.M3096

Herrgard, Markus J., Swainston, Neil, Dobson, Paul, Dunn, Warwick B., Arga, K. Yalcin, Arvas, Mikko, Buthgen, Nils, Borger, Simon, Costenoble, Roeland, Heinemann, Matthias, Hucka, Michael, Le Novere, Nicolas, Li, Peter, Liebermeister, Wolfram, Mo, Monica L., Oliveira, Ana Paula, Petranovic, Dina, Pettifer, Stephen, Simeonidis, Evangelos, Smallbone, Kieran, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Weichart, Dieter, Brent, Roger, Broomhead, David S., Westerhoff, Hans V., Kurdar, Betul, Penttila, Merja, Klipp, Edda, Palsson, Bernhard O., Sauer, Uwe, Oliver, Stephen G., Mendes, Pedro, Nielsen, Jens and Kell, Douglas B. 2008. A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nature Biotechnology 26 (10) , pp. 1155-1160. 10.1038/nbt1492

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Schober, Daniel, Sansone, Susanna-Assunta, Rebholz-Schuhmann, Dietrich, Kell, Douglas B. and Paton, Norman W. 2008. Facilitating the development of controlled vocabularies for metabolomics technologies with text mining. BMC Bioinformatics 9 (Supp 5) , S5. 10.1186/1471-2105-9-S5-S5
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Dunn, Warwick B., Broadhurst, David, Ellis, David I., Brown, Marie, Halsall, Anthony, O'Hagan, Steven, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Tseng, Andrew and Kell, Douglas B. 2008. A GC-TOF-MS study of the stability of serum and urine metabolomes during the UK Biobank sample collection and preparation protocols. International Journal of Epidemiology 37 (S1) , i23-i30. 10.1093/ije/dym281

Dunn, Warwick B., Broadhurst, David, Deepak, Sasalu, Buch, Mamta, McDowell, Garry, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Ellis, David I., Brooks, Nicholas, Kell, Douglas B. and Neyses, Ludwig 2007. Serum metabolomics reveals many novel metabolic markers of heart failure, including pseudouridine and 2-oxoglutarate. Metabolomics 3 (4) , pp. 413-426. 10.1007/s11306-007-0063-5

Sansone, Susanna-Assunta, Schober, Daniel, Atherton, Helen J., Fiehn, Oliver, Jenkins, Helen, Rocca-Serra, Philippe, Rubtsov, Denis V., Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Soldatova, Larisa, Taylor, Chris, Tseng, Andy and Viant, Mark R. 2007. Metabolomics standards initiative: ontology working group work in progress. Metabolomics 3 (3) , pp. 249-256. 10.1007/s11306-007-0069-z

Wilkinson, Stephen J, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Ellis, David I 2006. Genomes to systems 3. Metabolomics 2 (3) , pp. 165-170. 10.1007/s11306-006-0030-6

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Dunn, Warwick B., Velarde, Giles, Tseng, Andy, Jenkins, Helen, Hardy, Nigel, Oliver, Stephen G. and Kell, Douglas B. 2006. MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics. BMC Bioinformatics 7 , 281. 10.1186/1471-2105-7-281
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Kell, Douglas B., Brown, Marie, Davey, Hazel M., Dunn, Warwick B., Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Oliver, Stephen G. 2005. Metabolic footprinting and systems biology: the medium is the message. Nature Reviews. Microbiology 3 (7) , pp. 557-565. 10.1038/nrmicro1177

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Ananiadou, Sophia and Tsujii, Jun-Ichi I. 2005. MaSTerClass: a case-based reasoning system for the classification of biomedical terms. Bioinformatics 21 (11) , pp. 2748-2758. 10.1093/bioinformatics/bti338

Brown, Marie, Dunn, Warwick B., Ellis, David I., Goodacre, Royston, Handl, Julia, Knowles, Joshua D., O'Hagan, Steve, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Kell, Douglas B. 2005. A metabolome pipeline: from concept to data to knowledge. Metabolomics 1 (1) , pp. 39-51. 10.1007/s11306-005-1106-4

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Ananiadou, Sophia, McNaught, John and Kumar, Anand 2005. Text mining and ontologies in biomedicine: making sense of raw text. Briefings in Bioinformatics 6 (3) , pp. 239-251. 10.1093/bib/6.3.239

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Ananiadou, Sophia 2005. A flexible measure of contextual similarity for biomedical terms. Pacific Symposium on Biocomputing 10 , pp. 197-208.

Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Ananiadou, Sophia 2004. Using automatically learnt verb selectional preferences for classification of biomedical terms. Journal of Biomedical Informatics 37 (6) , pp. 483-497. 10.1016/j.jbi.2004.08.002

Nenadic, Goran, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Ananiadou, Sophia 2004. Mining term similarities from corpora. Terminology 10 (1) , pp. 55-80. 10.1075/term.10.1.04nen

Nenadic, Goran, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885 and Ananiadou, Sophia 2003. Terminology-driven mining of biomedical literature. Bioinformatics 19 (8) , pp. 938-943. 10.1093/bioinformatics/btg105

Nenadic, Goran, Mima, Hideki, Spasic, Irena ORCID: https://orcid.org/0000-0002-8132-3885, Ananiadou, Sophia and Tsujii, Junichi 2002. Terminology-driven literature mining and knowledge acquisition in biomedicine. International Journal of Medical Informatics 67 (1-3) , pp. 33-48. 10.1016/S1386-5056(02)00055-2

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